5个大鳞副泥鳅家系的遗传结构分析
Genetic Structure Analysis of Five Families of Paramisgurnus dabryanus
投稿时间:2014-06-29  修订日期:2014-08-15
DOI:10.15928/j.1674-3075.2015.01.010
中文关键词:大鳞副泥鳅  微卫星标记  家系  遗传结构
英文关键词:Paramisgurnus dabryanus  microsatellite markers  families  genetic structure
基金项目:江苏省科技厅项目(BE2012354);江苏省水产三项工程项目(PJ2011-62,DY2012-3);江苏省农业自主创新项目[CX(13)2042]
作者单位E-mail
叶竹青 苏州大学基础医学与生物科学学院江苏 苏州 215123 864195532@qq.com 
凌去非* 苏州大学基础医学与生物科学学院江苏 苏州 215123 lingqf@suda.edu.cn 
李彩娟 苏州大学基础医学与生物科学学院江苏 苏州 215123 1048141829@qq.com 
韩晓飞 苏州大学基础医学与生物科学学院江苏 苏州 215123 1185527238@qq.com 
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中文摘要:
      利用20个微卫星标记对5个大鳞副泥鳅(Paramisgurnus dabryanus)家系的遗传结构进行分析,探究家系遗传多样性及其亲缘关系的远近,为进一步遗传选育提供技术参数。结果显示,20个微卫星标记在5个家系中共检测到等位基因数53个,平均等位基因数2.65个,各位点的等位基因数2~4个;5个家系平均观测杂合度(Ho)0.3117~0.5542,平均期望杂合度(He)0.3261~0.4371,平均多态信息含量(PIC)0.3459~0.4538,平均固定系数(Fis)-0.0472(<0),遗传分化系数(Fst)0.2703;UPGMA聚类分析显示,AB2013F-7和AB2013F-81亲缘关系最远。研究表明,5个家系间遗传分化较大,具备较大的选育空间。
英文摘要:
      The pedigree method is one of the main methods for genetic breeding of fish because it reduces inbreeding and maintains gene diversity. An understanding of the genetic structure of Paramisgurnus dabryanus guides the breeding of this species. 20 microsatellite markers were used to investigate the genetic diversities and kinship of five Paramisgurnus dabryanus families (AB2013F-7,AB2013F-81,AB2013F-27,AB2013F-74,AB2013F-77) and the results provided technical parameters for selective breeding. The pectoral fins of 142 individuals from the five families were sampled and preserved with 95% ethanol. Genomic DNA was extracted from the pectoral fins using the phenol–chloroform extraction technique. PCR was performed in 20μL solution (2×Mix 10 μL,H2O 7 μL, DNA 1 μL) and the PCR products were analyzed using Popgene 32 software. A total of 53 alleles were detected in the five families of P. dabryanus in 20 simple sequence repeats (SSRs). The mean number of alleles was 2.65 with the number of alleles per locus ranging from two to four. The average observed heterozygosity (Ho), average expected heterozygosity (He) and average polymorphic information content (PIC) for the five families ranged, respectively, from 0.3117 to 0.5542 and 0.3261 to 0.4371, 0.3459 to 0.4538. The average fixed coefficient (Fis) was -0.0472 (<0) and the genetic differentiation coefficient (Fst) was 0.2703. Cluster analysis using the unweighted pair group method with arithmetic mean (UPGMA) showed the kinship of families AB2013F-7 and AB2013F-81 is the most distant. The results of this study indicate genetic differentiation among the five P. dabryanus families is sufficient for good breeding potential.
叶竹青,凌去非,李彩娟,韩晓飞.2015.5个大鳞副泥鳅家系的遗传结构分析[J].水生态学杂志,36(1):66-73.
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